Difference between revisions of "Building n by n squares"

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==Building $n \times n$ squares==
 
==Building $n \times n$ squares==
 
Since Winfree showed in his thesis <ref name=Winf98 /> that the aTAM is computationally universal, we know that we can algorithmically direct the growth of assemblies.  This ability allows for not only the creation of complicated and precise shapes, but also often for them to be created very tile type efficiently (i.e. they require small tile sets - those with few numbers of unique tile types).  A benchmark problem for tile-based self-assembly is that of assembling an $n \times n$ square since this requires that the tiles somehow compute the value of $n$ and thus "know when to stop" at the boundaries.  In <ref name =RotWin00> Rothemund and Winfree showed that binary counters can be used to guide the growth of squares and that thereby it is possible to self-assemble an $n \times n$ square using $O(\log n)$ tile types.
 
Since Winfree showed in his thesis <ref name=Winf98 /> that the aTAM is computationally universal, we know that we can algorithmically direct the growth of assemblies.  This ability allows for not only the creation of complicated and precise shapes, but also often for them to be created very tile type efficiently (i.e. they require small tile sets - those with few numbers of unique tile types).  A benchmark problem for tile-based self-assembly is that of assembling an $n \times n$ square since this requires that the tiles somehow compute the value of $n$ and thus "know when to stop" at the boundaries.  In <ref name =RotWin00> Rothemund and Winfree showed that binary counters can be used to guide the growth of squares and that thereby it is possible to self-assemble an $n \times n$ square using $O(\log n)$ tile types.
 
 
  
 
==References==
 
==References==
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Revision as of 11:34, 11 June 2013

Building \(n \times n\) squares

Since Winfree showed in his thesis [1] that the aTAM is computationally universal, we know that we can algorithmically direct the growth of assemblies. This ability allows for not only the creation of complicated and precise shapes, but also often for them to be created very tile type efficiently (i.e. they require small tile sets - those with few numbers of unique tile types). A benchmark problem for tile-based self-assembly is that of assembling an \(n \times n\) square since this requires that the tiles somehow compute the value of \(n\) and thus "know when to stop" at the boundaries. In Cite error: Closing </ref> missing for <ref> tag

[2]

[2]

[3]

[4]

[5]

</references>

  1. Cite error: Invalid <ref> tag; no text was provided for refs named Winf98
  2. 2.0 2.1 Paul W. K. Rothemund, Erik Winfree - The Program-size Complexity of Self-Assembled Squares (extended abstract)
    STOC '00: Proceedings of the thirty-second annual ACM Symposium on Theory of Computing pp. 459--468, Portland, Oregon, United States,2000
    Bibtex
    Author : Paul W. K. Rothemund, Erik Winfree
    Title : The Program-size Complexity of Self-Assembled Squares (extended abstract)
    In : STOC '00: Proceedings of the thirty-second annual ACM Symposium on Theory of Computing -
    Address : Portland, Oregon, United States
    Date : 2000
  3. Paul W. K. Rothemund - Theory and Experiments in Algorithmic Self-Assembly
    Ph.D. Thesis, University of Southern California , December 2001
    Bibtex
    Author : Paul W. K. Rothemund
    Title : Theory and Experiments in Algorithmic Self-Assembly
    In : Ph.D. Thesis, University of Southern California -
    Address :
    Date : December 2001
  4. James I. Lathrop, Jack H. Lutz, Scott M. Summers - Strict Self-Assembly of Discrete Sierpinski Triangles
    Theoretical Computer Science 410:384--405,2009
    Bibtex
    Author : James I. Lathrop, Jack H. Lutz, Scott M. Summers
    Title : Strict Self-Assembly of Discrete Sierpinski Triangles
    In : Theoretical Computer Science -
    Address :
    Date : 2009
  5. David Soloveichik, Erik Winfree - Complexity of Self-Assembled Shapes
    SIAM Journal on Computing 36(6):1544-1569,2007
    Bibtex
    Author : David Soloveichik, Erik Winfree
    Title : Complexity of Self-Assembled Shapes
    In : SIAM Journal on Computing -
    Address :
    Date : 2007